Bodenhausen, Natacha (2023) Predicting soil fungal communities from environmental properties. Keynote presentation at: Genetic Diversity Center Symposium, Zurich, Switzerland, 12.09.2023. [Completed]
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Summary in the original language of the document
In this study, we looked into whether we can predict the types of fungi in soil based on the soil's physical and chemical properties. We collected soil samples from 59 fields in Switzerland and analyzed both the soil properties and the types of fungi present using advanced sequencing techniques. We found that certain soil properties, like pH, potassium levels, and sand content, were particularly influential in determining the types of fungi present. Using this information, we developed a model that could successfully predict the fungal community in most soils. However, the model didn't work as well for soils with very unique properties or different fungal communities. Overall, being able to predict soil fungi based on soil properties could save time and effort compared to traditional sequencing methods, and it could have practical applications in agriculture, like monitoring pathogens, planning field treatments, or estimating crop yields.
EPrint Type: | Conference paper, poster, etc. |
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Type of presentation: | Keynote presentation |
Keywords: | leave‐one‐out validation, microbiome, prediction, soil fertility, soil properties, FiB10206, FiBL10188, FiBL10113 |
Agrovoc keywords: | Language Value URI English soil fertility http://aims.fao.org/aos/agrovoc/c_7170 English soil chemistry http://aims.fao.org/aos/agrovoc/c_7161 English microbiomes http://aims.fao.org/aos/agrovoc/c_10d1f665 |
Subjects: | Soil > Soil quality > Soil biology |
Research affiliation: | Switzerland > FiBL - Research Institute of Organic Agriculture Switzerland > Sustainability > Microbiom Switzerland > FiBL - Research Institute of Organic Agriculture Switzerland > Soil > Soil fertility |
Related Links: | https://www.fibl.org/en/themes/projectdatabase/projectitem/project/1404 |
Deposited By: | Bodenhausen, Dr Natacha |
ID Code: | 53428 |
Deposited On: | 06 Jun 2024 13:21 |
Last Modified: | 24 Sep 2024 07:44 |
Document Language: | English |
Status: | Unpublished |
Refereed: | Not peer-reviewed |
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