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Predicting soil fungal communities from environmental properties

Bodenhausen, Natacha (2023) Predicting soil fungal communities from environmental properties. Keynote presentation at: Genetic Diversity Center Symposium, Zurich, Switzerland, 12.09.2023. [Completed]

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Summary in the original language of the document

In this study, we looked into whether we can predict the types of fungi in soil based on the soil's physical and chemical properties. We collected soil samples from 59 fields in Switzerland and analyzed both the soil properties and the types of fungi present using advanced sequencing techniques. We found that certain soil properties, like pH, potassium levels, and sand content, were particularly influential in determining the types of fungi present. Using this information, we developed a model that could successfully predict the fungal community in most soils. However, the model didn't work as well for soils with very unique properties or different fungal communities. Overall, being able to predict soil fungi based on soil properties could save time and effort compared to traditional sequencing methods, and it could have practical applications in agriculture, like monitoring pathogens, planning field treatments, or estimating crop yields.


EPrint Type:Conference paper, poster, etc.
Type of presentation:Keynote presentation
Keywords:leave‐one‐out validation, microbiome, prediction, soil fertility, soil properties, FiB10206, FiBL10188, FiBL10113
Agrovoc keywords:
Language
Value
URI
English
soil fertility
http://aims.fao.org/aos/agrovoc/c_7170
English
soil chemistry
http://aims.fao.org/aos/agrovoc/c_7161
English
microbiomes
http://aims.fao.org/aos/agrovoc/c_10d1f665
Subjects: Soil > Soil quality > Soil biology
Research affiliation: Switzerland > FiBL - Research Institute of Organic Agriculture Switzerland > Sustainability > Microbiom
Switzerland > FiBL - Research Institute of Organic Agriculture Switzerland > Soil > Soil fertility
Related Links:https://www.fibl.org/en/themes/projectdatabase/projectitem/project/1404
Deposited By: Bodenhausen, Dr Natacha
ID Code:53428
Deposited On:06 Jun 2024 13:21
Last Modified:24 Sep 2024 07:44
Document Language:English
Status:Unpublished
Refereed:Not peer-reviewed

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