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Absolute qPCR quantification of arbuscular mycorrhiza fungi in crop plants (Roots2Res Practice Abstract)

Corona Ramírez, Andrea; Symanczik, Sarah and Bodenhausen, Natacha (2023) Absolute qPCR quantification of arbuscular mycorrhiza fungi in crop plants (Roots2Res Practice Abstract). Research Institute of Organic Agriculture FiBL, CH-Frick .

[thumbnail of Practice Abstract] PDF - English (Practice Abstract)
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Document available online at: https://zenodo.org/records/8392732


Summary in the original language of the document

Problem: Conventional methods to quantify arbuscular myc- orrhizal fungal (AMF) colonization include microsco- py, which involves staining of the roots and metic- ulous observation. This method is time consuming and subjective because it depends on the observer’s level of expertise.
Solution: The use of broad range qPCR primers was validated to quantify AMF root colonization in different crops. This high-throughput and reliable technique is ver- satile and suitable for a wide range of research pro- jects.


EPrint Type:Report
Keywords:quantification, qPCR, mycorrhiza, Root2Res, Abacus, FiBL1019502
Agrovoc keywords:
Language
Value
URI
English
mycorrhizae
http://aims.fao.org/aos/agrovoc/c_5023
English
root crops
http://aims.fao.org/aos/agrovoc/c_6641
English
soil fertility
http://aims.fao.org/aos/agrovoc/c_7170
English
crops
http://aims.fao.org/aos/agrovoc/c_1972
Subjects: Soil > Soil quality > Soil biology
Soil > Nutrient turnover
Crop husbandry > Crop health, quality, protection
Research affiliation: European Union > Horizon Europe > Roots2Res
Switzerland > FiBL - Research Institute of Organic Agriculture Switzerland > Soil > Nutrient management
Switzerland > FiBL - Research Institute of Organic Agriculture Switzerland > Soil > Soil fertility
Horizon Europe or H2020 Grant Agreement Number:101060124
Related Links:https://www.fibl.org/en/themes/projectdatabase/projectitem/project/2149
Deposited By: Bodenhausen, Dr Natacha
ID Code:52507
Deposited On:06 Feb 2024 11:31
Last Modified:06 Feb 2024 11:32
Document Language:English
Status:Unpublished
Refereed:Not peer-reviewed

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